Tuesday, December 04, 2007

Let the Mouse Party begin : Encehpalon #37 is up!

Encephalon #37 is up at A Blog Around The Clock. While I liked, amongst others , the post pitting amygadala (subjective) with insula (objective) in beauty perception, what I was mesmerized with was the Mouse Party post.

Mouse Party is a web resource developed by university of Utah, that lets you see with very cool animations the effects of common drugs of abuse like LSD, Ecstasy etc. Lately I have been blogging a bit about ecstasy , LSD (Leary's model of consciousness etc), so along with the mouse theme, this immediately caught my eye.

Sphere: Related Content

Thursday, November 29, 2007

The eight-fold structure of evolutionary biology/ cultural evolution

Regulars readers of this blog will know that I am sold on the eight-fold developmental theory that assumes that there are eight stages of development/evolution of any feature and I have explored this extensively. Five of these lower stages are at a different level and the upper 3 at a different level explain the development of the same phenomenon. for a quick summary and links to my eight-fold fascination please see this the first paragraph of this post. So it is no surprise that I was fascinated when I discovered that evolutionary biology is conceptualized as eight subjects or methods of inquiry and they also follow a 5 +3 pattern with 5 lower levels referring to within species evolution and the last 3 referring to between species evolution. This structure of evolutionary biology I discovered via a fascinating artcile that tries to find parallels between cultural evolution and biological evolution. The article is by Mesoudi et al (2006) and I will be heavily quoting from that paper.

First a very beautiful figure that shows the structure of evolutionary biology and draws parallels to cultural evolution. Explanation of figure follows.



The left hand side of Figure 1 illustrates the overall structure of evolutionary biology, as described by Futuyma (1998, pp. 12-14) in what is, perhaps, the most widely used undergraduate textbook in the field. The study of biological macroevolution deals with change at or above the species level, while biological microevolution concerns changes within populations of a single species. The former comprises systematics, paleobiology and biogeography, while the latter involves population genetics (theoretical, experimental and field-based), evolutionary ecology and molecular genetics. In Sections 2 and 3 we examine each of the sub-disciplines of evolutionary biology in turn, first outlining their general methods then briefly describing examples of recent studies to illustrate how those methods are applied and the kind of results they yield. This is followed in each case by a discussion of existing analogous or equivalent methods within the social sciences regarding human culture, again describing recent key studies. These cultural disciplines, and the way in which they map onto the structure of evolutionary biology, are illustrated on the right hand side of Figure 1. While there may be no obvious precedent for two distinct fields to exhibit the same internal structure, the similarity of underlying processes leads us to expect a correspondence.

Now let me come to the central theme of the paper that cultural evolution has parallels in evolutionary biology and the sub disciplines and methodologies from one can inform the other.

Parallels or analogies between biological and cultural evolution have been noted by a number of eminent figures from diverse fields of study.The implication of this growing body of theory is that culture exhibits key Darwinian evolutionary properties. If this is accepted, it follows that the same tools, methods and approaches that are used to study biological evolution may productively be applied to the study of human culture, and furthermore that the structure of a science of cultural evolution should broadly resemble the structure of evolutionary biology. In the present paper we attempt to make this comparison explicit, by examining the different approaches and methods used by evolutionary biologists and assessing whether there is an existing corresponding approach or method in the study of cultural evolution. Where such an existing correspondence is not found, we explore whether there is the potential to develop one. We also explore potential differences between biological and cultural evolution.


They also elaborate on benefits of the evolutionary eight-fold approach.

Second, and particularly relevant to this article, the theory of evolution encompasses and integrates a multitude of diverse sub-disciplines within biology, from behavioural ecology to paleobiology to genetics, with each sub-discipline stimulating and contributing to several others (see Mayr, 1982 for further details of this 'evolutionary synthesis'). The social sciences, in contrast, have no such general synthesising framework, and the greater part of disciplines such as cultural anthropology, archaeology, psychology, economics, sociology and history remain relatively insular and isolated, both from each other and from the biological and physical sciences. Adopting an evolutionary framework can potentially serve to highlight how these disciplines are, in fact, studying complementary aspects of the same problems, and emphasise how multiple and multidisciplinary approaches to these problems are not only possible but necessary for their full exposition. At present, many of the individual studies considered below are the result of independent developments at the fringes of separate fields of study. Placing these disparate studies side-by-side within a broader evolutionary framework, as is done here, will hopefully contribute towards creating a coherent unified movement and bring evolutionary analyses of cultural phenomena into the mainstream. They then go on and explore each of the subdivision in detail and draw parallels to cultural evolution and show how methods of evolutionary biology when applied to culture have helped solve many problems there.


They also analyze psychology as equivalent to experimental population genetics. Reproducing the relevant sections below:

One parallel with this work lies in laboratory based psychological experiments simulating cultural transmission. Where population genetic experiments simulate biological evolution by studying the transmission of genetic information from generation to generation through the reproduction of individuals, psychological experiments can potentially simulate cultural evolution by studying the transmission of cultural information (e.g. texts or behavioural rules) from one individual to another through social learning.

One method for simulating cultural evolution was developed by Gerard, Kluckhohn and Rapoport (1956) and Jacobs and Campbell (1961). A norm or bias is established in a group of participants, usually by using confederates, and one by one these participants are replaced with new, untrained participants. The degree to which the norm or bias remains in the group after all of the original group members have been replaced represents a measure of its tansmission to the new members.

For example, Baum et al. (2004) studied the transmission of traditions using a task in which participants received financial rewards for solving anagrams. Groups of individuals could choose to solve an anagram printed on either red or blue card: the red anagrams gave a small immediate payment, while the blue anagrams gave a larger payoff but were followed by a ‘time-out’ during which no anagrams could be solved. By manipulating the length of this time-out, the experimenters were able to determine which of the two anagrams gave the highest overall payoff (i.e. where the blue time-out was short, blue was optimal, and where the blue time-out was long, red was optimal). Every 12 minutes one member of the group was replaced with a new participant. It was found that traditions of the optimal choice emerged under each experimental condition, with existing group members instructing new members in this optimal tradition by transmitting information about payoffs and timeouts, or through
coercion.

Key similarities exist between this study and the experimental simulations of natural selection described above. In Kennington et al.’s (2003) study with Drosophila, where the experimentally determined conditions of low humidity favoured small body size, smaller individuals out-reproduced larger individuals. Hence genetic information determining ‘small body size’ was more likely to be transmitted to the next generation through biological reproduction, and the average body size of the population became gradually smaller. In Baum et al.’s (2004) study, where the experimentally determined conditions favoured red anagrams (when the blue time-out was relatively long), choosing red anagrams gave a larger payoff to the participants. Hence the behavioural rule ‘choose red’ was more likely to be transmitted to the new participants through cultural transmission, and the overall frequency of choosing red
gradually increased.

Baum et al.’s (2004) method could easily be adapted to study the cultural evolution of attitudes or beliefs. Groups of participants could be asked to discuss a contentious issue, then every generation the participant with the most extreme opinion in a certain direction removed and replaced with a random participant. After a number of generations the group should hold more extreme views (in the opposite direction to those of the removed participants) than average members of the larger population.


Finally they discuss psychology in relation to evolutionary ecology and neursocience / memetics in relation to molecular biology.

While genetic information is represented in sequences of DNA molecules, cultural information is represented primarily in the brain. Viewing culture as comprised of discrete units of information, or memes, can potentially make a complex system theoretically and empirically tractable, in the same way as the gene concept advanced biologists’ understanding of biological evolution. Although memes can be characterised as vague entities with flexible and fuzzy boundaries, so can the modern concept of the gene. It should be remembered that there was at least 50 years of productive investigation into biological microevolution before the molecular basis of genetic inheritance was determined, and even now it is only partly understood.
A deeper understanding of the neural and molecular basis of culturally acquired information must rely on technological advances in, for example, neuroimaging techniques. However, we should also reserve the possibility that the same cultural information is specified by different neural substrates in different brains, severely limiting such methods for studying cultural transmission. In this case there may be no cultural equivalent to molecular biology, although models and methods examining cultural transmission at the behavioural and cognitive levels can still provide important insights.


To me all this seems very interesting and I end with their conclusion:

The evidence discussed in this paper suggests that much potential exists for a comprehensive science of cultural evolution with broadly the same structure as the science of biological evolution, as outlined in Figure 1. This potential is already being realised for the study of cultural macroevolution and the mathematical modelling of cultural microevolution, with methods developed within evolutionary biology, such as phylogenetic analyses and population genetic models, being applied to cultural data. A number of opportunities exist for psychologists, sociologists and experimental economists to adopt the experimental methods and tools developed in population genetics to simulate cultural microevolution, and detect cultural evolution ‘in the wild’. Finally, the study of the neural basis of cultural transmission is seemingly dependent on advances in new technologies that should reveal how culturally acquired information is represented in the brain.

In short, we submit that the argument that culture exhibits a number of key Darwinian
properties is well-supported, and advocate taking advantage of this in order to use evolutionary biology as a model for integrating a multitude of separate approaches within the social sciences, and, where appropriate, borrowing some of the methods developed by evolutionary biologists to solve similar problems. Putting disparate studies from presently unconnected disciplines together into a broad evolutionary context adds value to each of the individual studies, because it illustrates that the degree of progress in this area is far more impressive than hitherto conceived. We suggest that these studies can now be said to be aligned within a unified ‘movement’, and that if this Darwinian evolutionary movement could be better co-ordinated, a more persuasive and important direction could be put on much work in the social sciences.



Hat tip: Natural Rationality

Sphere: Related Content

Ecstasy for PTSD

There is an in-depth and interesting article in Washington Post magazine regarding recent attempts to find therapeutic effects of MDMA or Ecstasy. It is an interesting read and readers of this blog will definitely find it interesting.
Thanks to Neurophiliosophy for this elaborate blog post regarding the same.

Sphere: Related Content

My first book published!!

No, its not a Psychology/ Neuroscience book....It is a poetry book and I have self-published it , online using 'If I were a book . com'. The poetry book titled "Songs to Soothe Your Soul"contains sonnets I wrote during my college years. Maybe someone would like to psycho-analyze them!!

The site offers chance for getting published in the real world , but for that to happen readers have to read the book and rate it highly so that publishers would bother to have a look. SO my personal request to you all to go on the site, read the poems and rate as you like it!! I'll also be adding a link to that book in my sidebar.

By the way, this is just a taste of things to come. I have written a book title "The Sculptor and the Sandman", which is psychologically inspired and focussed on delineating the psychotic and schizophrenic experience and how that may differ from other world views like that of a rational scientist (may having ASD). So watch this space for more info on that!!

Sphere: Related Content

Wednesday, November 28, 2007

The insula effect: excerpt from Blakeslee's book

The excellent science writer Sandra Blakeslee, has co-authored a book with her son, titled "The Body has a Mind of its Own" and an excerpt from the same is available on the Dana foundations website (as part of Cerebrum). The excerpt talks about right frontal insula and how that region is used to map the interoceptive physical sensations and how that also leads to an emotional map. the book seems promising from the excerpt.

One of the experiments involved subjects monitoring their heartbeats and those who could do this well also had high emotional intelligence.

But the most significant finding in Critchley’s study involved just one brain region, the right frontal insula. This area showed the greatest activity in those who were best at following their heartbeats. Moreover, these were the people who scored highest on a standardized questionnaire to probe their empathy levels. So the better you are at tracking your own heartbeats, Critchley says, the better you are at experiencing the full gamut of human emotions and feelings. The more viscerally aware, the more emotionally attuned you are.

Your right frontal insula “lights up” when you feel all the quintessential human emotions—love, hate, lust, disgust, gratitude, resentment, self-confidence, embarrassment, trust, distrust, empathy, contempt, approval, disdain, pride, humiliation, truthfulness, deceit, atonement, guilt. It also “lights up” when you feel strong sensations, from physical pain to a fluttery stomach to tingling loins.

This dual physical-emotional sensitivity is not just a coincidence. The right frontal insula is where conscious physical sensation and conscious emotional awareness coemerge. Consider this amazing fact: The right frontal insula is active both when you experience literal physical pain and when you experience the psychic “pain” of rejection or the social exclusion of being shunned. It lights up when you feel someone is treating you unfairly. Scanning experiments have proven all this, and the results are profound. Welcome to one of the most important regions in the human brain.


The finding that both emotional and interoceptive maps are represented in the same brain region is definitely an important clue to the mysteries of how our emotions work.

Sphere: Related Content

Thursday, November 22, 2007

The Mouse Trap's reading level: Genius :-) !?!?!!??

As per a new tool available, the reading level of this blog is GENIUS!!

cash advance

Cash Advance Loans




I take this as a compliment to the readers of this blog....they all fall under the genius category as they have been reading this blog for so long- and not as a marker of the fact that some of the blog posts may be eccentric and connecting apparently disparate themes. I guess the tool sees that as a mark of genius...so be it!! Three cheers to The Mouse Trap Reading Community!!

I discovered this via IQ corner which discovered this via Omni Brain.

Sphere: Related Content

Tuesday, November 20, 2007

Infants have a sense of probability

Probability of an event is measured as the number of ways in which the event can occur compared to the entire number of ways that constitute the event space (all events that can happen). thus, if a coin is tossed once then the probability of getting a head is 1 (no. of ways in which the head can occur) / 2 (the total number of events that can happen- either head or tail). Thus the probability is 0.5. This way of envisaging probability, as something which exits prior to the toss of coin, is important and should be distinguished form the statistical measure that also says that if you tossed the coin an infinite number of time you would get head on 50 % or half of the of trials. Thus, the statistical concept of probability of occurrence of an event and the intuitive concept based on event spaces are quite different.

It is no wonder that we are endowed with the statistical concept of measuring or predicting the likelihood of an event based on prior experiences and frequency of occurrences of the event. After all for us to survive this ability would be of much use, helping us predict future events based on past outcomes. however, whether a sense of probability based on event spaces is also likely to evolve was more doubtful. Now a recent study in PNAS by Teglas et al, suggests that infants have a sense of probability and that frequency-based judgments do not influence their predictions (or reaction times linked to expectation of the outcome) unless they are as old as 4 yrs of age. This strongly suggests that sense of probability has evolved and when the predictions based on that intuitive faculty are not inline with the frequency of actual past outcomes, then the frequency based reasoning only kicks in quite late in development. This is an important study as it somehow turns the table on frequency-based understanding of probability in humans as we intuitively fell.

Please find below excerpts from the same.


Rational agents should integrate probabilities in their predictions about uncertain future events. However, whether humans can do this, and if so, how this ability originates, are controversial issues. Here, we show that 12-month-olds have rational expectations about the future based on estimations of event possibilities, without the need of sampling past experiences. We also show that such natural expectations influence preschoolers’ reaction times, while frequencies modify motor responses, but not overt judgments, only after 4 years of age. Our results suggest that at the onset of human decision processes the mind contains an intuition of elementary probability that cannot be reduced to the encountered frequency of events or elementary heuristics.

Our experiments show that natural intuitions of probabilities guide expectations for future outcomes early in development. Infants put their early numerical knowledge of small quantities to the service of higher-level processes of event interpretation (20), shaping rational expectations of what comes next based on the probable outcomes of what they see now. Such intuitions do not arise by the proved human prowess at sampling distributions. When experienced frequency disagrees with prior probability, it is only after substantial exposure to a sample of outcomes that participants’ motor responses overcome natural expectations of the likely event, becoming slower for the likely but infrequent outcomes, and this only after 3 years. Indeed, even at 5, when the motor system adapts to experienced frequencies, the original probability intuitions still shape overt judgment.

Sphere: Related Content

Thursday, November 15, 2007

(One of) The gene for PPI discovered

Prepulse inhibition is an enduring phenotype of schizophrenia. In simple words, PPI is the diminished startle response exhibited by an organism, when a weaker stimulus precedes a stronger, normally-startle-response-producing stimulus. It is believed that PPI deficits result from the sensorimotor gating deficits present in Schizophrenia probands. the graphic below shows how the normal prepulse inhibition works. In schizophrenia, this doesn't quite work and the startle response does not diminish with a prepulse being present.


A recent study by Akiko et al in PLOS biology has found a gene that , when knocked out in mice, led to PPI deficits akin to that seen in Schizophrenia. They also used Quantitative Trait Loci method to find the gene associated with PPI and found FABP7 to fit the bill. I present here, the abstract, author's summary and conclusion.

Deficits in prepulse inhibition (PPI) are a biological marker for schizophrenia. To unravel the mechanisms that control PPI, we performed quantitative trait loci (QTL) analysis on 1,010 F2 mice derived by crossing C57BL/6 (B6) animals that show high PPI with C3H/He (C3) animals that show low PPI. We detected six major loci for PPI, six for the acoustic startle response, and four for latency to response peak, some of which were sex-dependent. A promising candidate on the Chromosome 10-QTL was Fabp7 (fatty acid binding protein 7, brain), a gene with functional links to the N-methyl-D-aspartic acid (NMDA) receptor and expression in astrocytes. Fabp7-deficient mice showed decreased PPI and a shortened startle response latency, typical of the QTL's proposed effects. A quantitative complementation test supported Fabp7 as a potential PPI-QTL gene, particularly in male mice. Disruption of Fabp7 attenuated neurogenesis in vivo. Human FABP7 showed altered expression in schizophrenic brains and genetic association with schizophrenia, which were both evident in males when samples were divided by sex. These results suggest that FABP7 plays a novel and crucial role, linking the NMDA, neurodevelopmental, and glial theories of schizophrenia pathology and the PPI endophenotype, with larger or overt effects in males. We also discuss the results from the perspective of fetal programming.

A startle response to an unexpected, strong startling stimulus can be suppressed by an immediately preceding low-intensity stimulus, thereby eliciting little behavioral response. This phenomenon, called prepulse inhibition (PPI), has been observed in all mammals tested and is thought to reflect sensory-motor gating functions in organisms. PPI is diminished in human schizophrenia, raising the possibility that PPI might serve as a potential biological marker for the disease. Once the genes regulating PPI in lower animals are identified, it is expected that the human orthologs will be strong candidate genes for schizophrenia. In this study, we first performed a genetic dissection of mouse PPI using quantitative trait loci analysis, which detects chromosomal regions harboring causative genes. Further analyses including those of knockout mice, allowed us to identify one potential causative gene, Fabp7 (fatty acid binding protein 7, brain), a chaperon for the essential fatty acid docosahexaenoic acid. Human studies showed that the FABP7 gene is modestly associated with schizophrenia and that transcript expression levels are up-regulated in schizophrenic brains. From these results, we propose that a FABP7 protein-mediated disturbance of essential lipid metabolism in developing brains may be one risk factor in the development of schizophrenia, with a greater effect in males.

The evidence accumulated in this study consistently supports causation by Fabp7 as the sole gene or one of the multiple genetic substrates underlying the Chromosome-10 QTL of PPI. The gene's effects may be exerted through differential regulation of transcript levels in B6 and C3 mice at a critical period. Importantly, the FABP7 gene, which is modestly associated with schizophrenia in the current study, has the potential to link together the three compelling etiological hypotheses of schizophrenia, namely the NMDA, developmental, and glial (astrocyte) theories . The gene appears to make a larger contribution to PPI and schizophrenia in males. The remaining newly identified but uncharacterized QTLs in this study should provide a valuable resource for continuing molecular studies into PPI and schizophrenia mechanisms. Finally, there are no established prophylactic interventions for schizophrenia. Our results raise the possibility of cohort studies to examine whether replenishment of DHA in pregnant mothers can be beneficial in reducing the chance of schizophrenia development in their offspring, especially for high-risk families. Such analyses should preferably take into account genotypes that affect function and expression of FABP7 via both direct and indirect mechanisms.

I am excited by this research. The endophenotype-leading-to-genotype sort of research is very promising in that it treats complex disorders like schizophrenia one small step at a time and by identifying genes that may be underlying the schizophrenic condition, give us insights into the mechanisms involved. Anyway, I myself strongly believe that sensory gating theory of schizophrenia is on the right track and studies like these can only lead us closer to solving the mystery. One particular thing to note is that FABP7 has differential sex effects with its effects being more prominent in males and this too fits nicely with the fact that schizophrenia is more common in males and occurs at earlier age.

Sphere: Related Content